Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LdlrP35951 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.37□□□□□ -0.27
LdlrP35951 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LdlrP35951 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.36□□□□□ -0.27
LdlrP35951 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.36□□□□□ -0.27
LdlrP35951 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.36□□□□□ -0.27
LdlrP35951 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LdlrP35951 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
LdlrP35951 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LdlrP35951 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Gm24543-201ENSMUST00000103867 82 ntBASIC13.36□□□□□ -0.27
LdlrP35951 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
LdlrP35951 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Gm6218-201ENSMUST00000219812 628 ntBASIC13.36□□□□□ -0.27
LdlrP35951 Gm16476-201ENSMUST00000221544 139 ntBASIC13.36□□□□□ -0.27
LdlrP35951 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.36□□□□□ -0.27
LdlrP35951 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.36□□□□□ -0.27
LdlrP35951 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LdlrP35951 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.36□□□□□ -0.27
LdlrP35951 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.36□□□□□ -0.27
LdlrP35951 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.36□□□□□ -0.27
LdlrP35951 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LdlrP35951 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LdlrP35951 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.35□□□□□ -0.27
LdlrP35951 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LdlrP35951 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LdlrP35951 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LdlrP35951 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.35□□□□□ -0.27
LdlrP35951 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LdlrP35951 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LdlrP35951 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.35□□□□□ -0.27
LdlrP35951 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LdlrP35951 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LdlrP35951 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.35□□□□□ -0.27
LdlrP35951 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.35□□□□□ -0.27
LdlrP35951 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.35□□□□□ -0.27
LdlrP35951 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.35□□□□□ -0.27
LdlrP35951 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LdlrP35951 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LdlrP35951 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LdlrP35951 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LdlrP35951 Gm25857-201ENSMUST00000082788 129 ntBASIC13.35□□□□□ -0.27
LdlrP35951 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LdlrP35951 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LdlrP35951 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LdlrP35951 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LdlrP35951 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LdlrP35951 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LdlrP35951 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LdlrP35951 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LdlrP35951 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LdlrP35951 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LdlrP35951 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LdlrP35951 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LdlrP35951 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LdlrP35951 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LdlrP35951 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LdlrP35951 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
LdlrP35951 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
LdlrP35951 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.34□□□□□ -0.27
LdlrP35951 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.34□□□□□ -0.27
LdlrP35951 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
LdlrP35951 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.34□□□□□ -0.27
LdlrP35951 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LdlrP35951 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms