Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a11P31650 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a11P31650 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a11P31650 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a11P31650 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a11P31650 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a11P31650 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a11P31650 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a11P31650 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a11P31650 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Slc6a11P31650 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.75□□□□□ -0.37
Slc6a11P31650 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.75□□□□□ -0.37
Slc6a11P31650 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a11P31650 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Slc6a11P31650 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Slc6a11P31650 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a11P31650 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Slc6a11P31650 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a11P31650 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.75□□□□□ -0.37
Slc6a11P31650 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a11P31650 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a11P31650 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Slc6a11P31650 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a11P31650 Gm8602-201ENSMUST00000184045 607 ntBASIC12.75□□□□□ -0.37
Slc6a11P31650 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a11P31650 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a11P31650 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.75□□□□□ -0.37
Slc6a11P31650 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.75□□□□□ -0.37
Slc6a11P31650 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.75□□□□□ -0.37
Slc6a11P31650 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.75□□□□□ -0.37
Slc6a11P31650 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a11P31650 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a11P31650 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a11P31650 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a11P31650 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.75□□□□□ -0.37
Slc6a11P31650 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Slc6a11P31650 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a11P31650 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a11P31650 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a11P31650 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.74□□□□□ -0.37
Slc6a11P31650 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.74□□□□□ -0.37
Slc6a11P31650 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Slc6a11P31650 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Slc6a11P31650 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.74□□□□□ -0.37
Slc6a11P31650 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Slc6a11P31650 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Slc6a11P31650 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Slc6a11P31650 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.74□□□□□ -0.37
Slc6a11P31650 Mir1938-201ENSMUST00000158746 100 ntBASIC12.74□□□□□ -0.37
Slc6a11P31650 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.74□□□□□ -0.37
Slc6a11P31650 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Slc6a11P31650 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.74□□□□□ -0.37
Slc6a11P31650 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Slc6a11P31650 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Slc6a11P31650 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a11P31650 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a11P31650 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.73□□□□□ -0.37
Slc6a11P31650 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a11P31650 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a11P31650 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a11P31650 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.73□□□□□ -0.37
Slc6a11P31650 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a11P31650 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a11P31650 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Slc6a11P31650 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a11P31650 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a11P31650 Gm15653-201ENSMUST00000119247 907 ntBASIC12.73□□□□□ -0.37
Slc6a11P31650 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.73□□□□□ -0.37
Slc6a11P31650 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.73□□□□□ -0.37
Slc6a11P31650 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.73□□□□□ -0.37
Slc6a11P31650 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.73□□□□□ -0.37
Slc6a11P31650 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a11P31650 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.73□□□□□ -0.37
Slc6a11P31650 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a11P31650 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.73□□□□□ -0.37
Slc6a11P31650 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a11P31650 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms