Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Gm27701-201ENSMUST00000184498 110 ntBASIC13.6□□□□□ -0.23
Slc6a13P31649 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.6□□□□□ -0.23
Slc6a13P31649 Gm28911-201ENSMUST00000188837 117 ntBASIC13.6□□□□□ -0.23
Slc6a13P31649 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.6□□□□□ -0.23
Slc6a13P31649 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.6□□□□□ -0.23
Slc6a13P31649 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.6□□□□□ -0.23
Slc6a13P31649 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Slc6a13P31649 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.6□□□□□ -0.23
Slc6a13P31649 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Slc6a13P31649 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
Slc6a13P31649 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Slc6a13P31649 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Slc6a13P31649 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.59□□□□□ -0.23
Slc6a13P31649 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Slc6a13P31649 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Slc6a13P31649 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.59□□□□□ -0.23
Slc6a13P31649 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.59□□□□□ -0.23
Slc6a13P31649 Gm44397-201ENSMUST00000195950 113 ntBASIC13.59□□□□□ -0.23
Slc6a13P31649 Gm8463-201ENSMUST00000208573 613 ntBASIC13.59□□□□□ -0.23
Slc6a13P31649 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Slc6a13P31649 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.59□□□□□ -0.23
Slc6a13P31649 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a13P31649 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Slc6a13P31649 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Slc6a13P31649 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.58□□□□□ -0.23
Slc6a13P31649 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.58□□□□□ -0.23
Slc6a13P31649 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.58□□□□□ -0.23
Slc6a13P31649 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Slc6a13P31649 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Slc6a13P31649 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a13P31649 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.58□□□□□ -0.24
Slc6a13P31649 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a13P31649 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Slc6a13P31649 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Slc6a13P31649 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.58□□□□□ -0.24
Slc6a13P31649 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a13P31649 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a13P31649 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.58□□□□□ -0.24
Slc6a13P31649 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.58□□□□□ -0.24
Slc6a13P31649 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a13P31649 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a13P31649 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a13P31649 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a13P31649 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a13P31649 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Slc6a13P31649 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a13P31649 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a13P31649 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a13P31649 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.58□□□□□ -0.24
Slc6a13P31649 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a13P31649 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a13P31649 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.58□□□□□ -0.24
Slc6a13P31649 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a13P31649 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a13P31649 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a13P31649 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a13P31649 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a13P31649 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a13P31649 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a13P31649 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms