Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40lgP27548 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40lgP27548 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40lgP27548 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40lgP27548 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40lgP27548 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.4□□□□□ -0.42
Cd40lgP27548 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.4□□□□□ -0.42
Cd40lgP27548 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40lgP27548 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40lgP27548 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40lgP27548 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40lgP27548 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40lgP27548 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40lgP27548 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.4□□□□□ -0.42
Cd40lgP27548 Gm5279-201ENSMUST00000199575 745 ntBASIC12.4□□□□□ -0.42
Cd40lgP27548 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.4□□□□□ -0.42
Cd40lgP27548 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.4□□□□□ -0.42
Cd40lgP27548 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cd40lgP27548 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cd40lgP27548 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40lgP27548 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40lgP27548 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40lgP27548 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.4□□□□□ -0.42
Cd40lgP27548 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cd40lgP27548 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cd40lgP27548 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.4□□□□□ -0.43
Cd40lgP27548 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cd40lgP27548 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.39□□□□□ -0.43
Cd40lgP27548 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.39□□□□□ -0.43
Cd40lgP27548 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Cd40lgP27548 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.39□□□□□ -0.43
Cd40lgP27548 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.39□□□□□ -0.43
Cd40lgP27548 Gm12091-201ENSMUST00000146791 830 ntBASIC12.39□□□□□ -0.43
Cd40lgP27548 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.39□□□□□ -0.43
Cd40lgP27548 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cd40lgP27548 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Cd40lgP27548 Gm18018-201ENSMUST00000198273 408 ntBASIC12.39□□□□□ -0.43
Cd40lgP27548 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.39□□□□□ -0.43
Cd40lgP27548 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cd40lgP27548 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Cd40lgP27548 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Cd40lgP27548 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40lgP27548 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.38□□□□□ -0.43
Cd40lgP27548 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Cd40lgP27548 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.38□□□□□ -0.43
Cd40lgP27548 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.38□□□□□ -0.43
Cd40lgP27548 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cd40lgP27548 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.38□□□□□ -0.43
Cd40lgP27548 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.38□□□□□ -0.43
Cd40lgP27548 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.38□□□□□ -0.43
Cd40lgP27548 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Cd40lgP27548 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
Cd40lgP27548 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.38□□□□□ -0.43
Cd40lgP27548 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 114.5 ms