Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Gm14057-201ENSMUST00000120631 482 ntBASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Gm17795-201ENSMUST00000214505 757 ntBASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Tnfrsf1aP25118 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Gm7063-201ENSMUST00000186840 981 ntBASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms