Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Gm43435-201ENSMUST00000199996 1438 ntBASIC11.09□□□□□ -0.63
Tnfrsf9P20334 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Gm13392-201ENSMUST00000117708 150 ntBASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Gm8062-201ENSMUST00000139696 444 ntBASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Gm29107-201ENSMUST00000190910 347 ntBASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Gm2451-201ENSMUST00000199447 999 ntBASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Gm10290-201ENSMUST00000200451 999 ntBASIC11.09□□□□□ -0.63
Tnfrsf9P20334 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf9P20334 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Tnfrsf9P20334 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Gm15393-201ENSMUST00000120499 219 ntBASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Gm42693-201ENSMUST00000196779 631 ntBASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.08□□□□□ -0.64
Tnfrsf9P20334 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.08□□□□□ -0.64
Tnfrsf9P20334 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms