Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.87□□□□□ -0.35
Cntn1P12960 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cntn1P12960 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.86□□□□□ -0.35
Cntn1P12960 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cntn1P12960 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cntn1P12960 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cntn1P12960 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cntn1P12960 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cntn1P12960 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Cntn1P12960 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.86□□□□□ -0.35
Cntn1P12960 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cntn1P12960 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cntn1P12960 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cntn1P12960 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Cntn1P12960 Gm27847-201ENSMUST00000183711 107 ntBASIC12.86□□□□□ -0.35
Cntn1P12960 Gm27375-201ENSMUST00000183799 107 ntBASIC12.86□□□□□ -0.35
Cntn1P12960 Mir7085-201ENSMUST00000184353 66 ntBASIC12.86□□□□□ -0.35
Cntn1P12960 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cntn1P12960 Gm7561-201ENSMUST00000211203 886 ntBASIC12.86□□□□□ -0.35
Cntn1P12960 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.86□□□□□ -0.35
Cntn1P12960 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.86□□□□□ -0.35
Cntn1P12960 Itm2b-204ENSMUST00000228637 783 ntBASIC12.86□□□□□ -0.35
Cntn1P12960 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cntn1P12960 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cntn1P12960 Gm6091-201ENSMUST00000098307 165 ntBASIC12.86□□□□□ -0.35
Cntn1P12960 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cntn1P12960 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cntn1P12960 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cntn1P12960 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cntn1P12960 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.86□□□□□ -0.35
Cntn1P12960 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cntn1P12960 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cntn1P12960 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cntn1P12960 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cntn1P12960 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cntn1P12960 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cntn1P12960 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cntn1P12960 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Cntn1P12960 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.85□□□□□ -0.35
Cntn1P12960 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.85□□□□□ -0.35
Cntn1P12960 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.85□□□□□ -0.35
Cntn1P12960 Gm43438-201ENSMUST00000198133 379 ntBASIC12.85□□□□□ -0.35
Cntn1P12960 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.85□□□□□ -0.35
Cntn1P12960 Gm8598-201ENSMUST00000221184 836 ntBASIC12.85□□□□□ -0.35
Cntn1P12960 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.85□□□□□ -0.35
Cntn1P12960 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cntn1P12960 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cntn1P12960 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Cntn1P12960 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cntn1P12960 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.85□□□□□ -0.35
Cntn1P12960 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.84□□□□□ -0.35
Cntn1P12960 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn1P12960 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn1P12960 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
Cntn1P12960 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.84□□□□□ -0.35
Cntn1P12960 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn1P12960 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn1P12960 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn1P12960 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn1P12960 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn1P12960 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.84□□□□□ -0.35
Cntn1P12960 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn1P12960 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn1P12960 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.84□□□□□ -0.35
Cntn1P12960 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Cntn1P12960 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn1P12960 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.84□□□□□ -0.35
Cntn1P12960 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.84□□□□□ -0.35
Cntn1P12960 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.84□□□□□ -0.35
Cntn1P12960 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.84□□□□□ -0.35
Cntn1P12960 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.84□□□□□ -0.35
Cntn1P12960 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.84□□□□□ -0.35
Cntn1P12960 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cntn1P12960 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.84□□□□□ -0.35
Cntn1P12960 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms