Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.78□□□□□ -0.36
Lire1P11260 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lire1P11260 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lire1P11260 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lire1P11260 Gm12490-201ENSMUST00000120255 560 ntBASIC12.78□□□□□ -0.36
Lire1P11260 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lire1P11260 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lire1P11260 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lire1P11260 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lire1P11260 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.78□□□□□ -0.36
Lire1P11260 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.78□□□□□ -0.36
Lire1P11260 Gm18187-201ENSMUST00000196476 984 ntBASIC12.78□□□□□ -0.36
Lire1P11260 Gm2451-201ENSMUST00000199447 999 ntBASIC12.78□□□□□ -0.36
Lire1P11260 Gm10290-201ENSMUST00000200451 999 ntBASIC12.78□□□□□ -0.36
Lire1P11260 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Lire1P11260 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.78□□□□□ -0.36
Lire1P11260 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.78□□□□□ -0.36
Lire1P11260 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lire1P11260 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lire1P11260 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lire1P11260 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lire1P11260 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.78□□□□□ -0.36
Lire1P11260 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lire1P11260 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lire1P11260 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lire1P11260 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lire1P11260 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Lire1P11260 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.78□□□□□ -0.36
Lire1P11260 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lire1P11260 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.78□□□□□ -0.36
Lire1P11260 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lire1P11260 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lire1P11260 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.78□□□□□ -0.36
Lire1P11260 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lire1P11260 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lire1P11260 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lire1P11260 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Lire1P11260 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lire1P11260 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lire1P11260 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lire1P11260 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lire1P11260 Gm43433-201ENSMUST00000196573 481 ntBASIC12.77□□□□□ -0.37
Lire1P11260 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lire1P11260 Gm7653-201ENSMUST00000214567 508 ntBASIC12.77□□□□□ -0.37
Lire1P11260 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.77□□□□□ -0.37
Lire1P11260 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.77□□□□□ -0.37
Lire1P11260 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lire1P11260 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lire1P11260 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lire1P11260 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lire1P11260 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lire1P11260 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lire1P11260 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Lire1P11260 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.77□□□□□ -0.37
Lire1P11260 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lire1P11260 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.77□□□□□ -0.37
Lire1P11260 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Lire1P11260 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.77□□□□□ -0.37
Lire1P11260 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lire1P11260 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.76□□□□□ -0.37
Lire1P11260 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Lire1P11260 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.76□□□□□ -0.37
Lire1P11260 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.76□□□□□ -0.37
Lire1P11260 Gm14127-201ENSMUST00000117906 678 ntBASIC12.76□□□□□ -0.37
Lire1P11260 Gm5479-201ENSMUST00000160578 435 ntBASIC12.76□□□□□ -0.37
Lire1P11260 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Lire1P11260 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Lire1P11260 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Lire1P11260 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lire1P11260 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Lire1P11260 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Lire1P11260 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms