Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC10.52□□□□□ -0.72
Hoxd3P09027 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hoxd3P09027 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Hoxd3P09027 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC10.52□□□□□ -0.73
Hoxd3P09027 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Hoxd3P09027 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.52□□□□□ -0.73
Hoxd3P09027 Gm13689-201ENSMUST00000119360 685 ntBASIC10.52□□□□□ -0.73
Hoxd3P09027 Gm15824-201ENSMUST00000119516 955 ntBASIC10.52□□□□□ -0.73
Hoxd3P09027 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.52□□□□□ -0.73
Hoxd3P09027 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Hoxd3P09027 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Hoxd3P09027 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC10.52□□□□□ -0.73
Hoxd3P09027 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Gm2495-201ENSMUST00000191160 466 ntBASIC10.52□□□□□ -0.73
Hoxd3P09027 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC10.52□□□□□ -0.73
Hoxd3P09027 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Gm6983-201ENSMUST00000214912 628 ntBASIC10.52□□□□□ -0.73
Hoxd3P09027 Gm5035-201ENSMUST00000215581 927 ntBASIC10.52□□□□□ -0.73
Hoxd3P09027 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Gm5161-201ENSMUST00000075243 853 ntBASIC10.52□□□□□ -0.73
Hoxd3P09027 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Hoxd3P09027 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Hoxd3P09027 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Hoxd3P09027 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Hoxd3P09027 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Gm28182-201ENSMUST00000188354 2477 ntBASIC10.52□□□□□ -0.73
Hoxd3P09027 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC10.52□□□□□ -0.73
Hoxd3P09027 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC10.52□□□□□ -0.73
Hoxd3P09027 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Gm8872-201ENSMUST00000197475 1341 ntBASIC10.52□□□□□ -0.73
Hoxd3P09027 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.52□□□□□ -0.73
Hoxd3P09027 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC10.52□□□□□ -0.73
Hoxd3P09027 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC10.52□□□□□ -0.73
Hoxd3P09027 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.52□□□□□ -0.73
Hoxd3P09027 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxd3P09027 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Hoxd3P09027 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Hoxd3P09027 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Hoxd3P09027 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Hoxd3P09027 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC10.51□□□□□ -0.73
Hoxd3P09027 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Gm4984-201ENSMUST00000115987 360 ntBASIC10.51□□□□□ -0.73
Hoxd3P09027 Gm12928-201ENSMUST00000117115 573 ntBASIC10.51□□□□□ -0.73
Hoxd3P09027 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Mir1894-201ENSMUST00000122802 81 ntBASIC10.51□□□□□ -0.73
Hoxd3P09027 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Gm22923-201ENSMUST00000174952 110 ntBASIC10.51□□□□□ -0.73
Hoxd3P09027 Gm6244-201ENSMUST00000178732 841 ntBASIC10.51□□□□□ -0.73
Hoxd3P09027 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.51□□□□□ -0.73
Hoxd3P09027 Gm44719-201ENSMUST00000206404 149 ntBASIC10.51□□□□□ -0.73
Hoxd3P09027 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Hoxd3P09027 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.51□□□□□ -0.73
Hoxd3P09027 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC10.51□□□□□ -0.73
Hoxd3P09027 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Matn2-206ENSMUST00000228570 2798 ntBASIC10.51□□□□□ -0.73
Hoxd3P09027 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxd3P09027 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Hoxd3P09027 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms