Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
ApoeP08226 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ApoeP08226 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ApoeP08226 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ApoeP08226 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.68□□□□□ -0.38
ApoeP08226 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.68□□□□□ -0.38
ApoeP08226 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
ApoeP08226 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.68□□□□□ -0.38
ApoeP08226 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
ApoeP08226 Gm12428-201ENSMUST00000119844 727 ntBASIC12.68□□□□□ -0.38
ApoeP08226 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.68□□□□□ -0.38
ApoeP08226 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.68□□□□□ -0.38
ApoeP08226 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.68□□□□□ -0.38
ApoeP08226 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.68□□□□□ -0.38
ApoeP08226 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.68□□□□□ -0.38
ApoeP08226 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
ApoeP08226 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.68□□□□□ -0.38
ApoeP08226 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
ApoeP08226 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ApoeP08226 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
ApoeP08226 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ApoeP08226 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
ApoeP08226 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
ApoeP08226 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ApoeP08226 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ApoeP08226 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ApoeP08226 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
ApoeP08226 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
ApoeP08226 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ApoeP08226 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ApoeP08226 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ApoeP08226 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
ApoeP08226 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.67□□□□□ -0.38
ApoeP08226 Gm25287-201ENSMUST00000103846 110 ntBASIC12.67□□□□□ -0.38
ApoeP08226 Gm22918-201ENSMUST00000103855 110 ntBASIC12.67□□□□□ -0.38
ApoeP08226 Gm15770-201ENSMUST00000117498 584 ntBASIC12.67□□□□□ -0.38
ApoeP08226 Gm15460-201ENSMUST00000118147 391 ntBASIC12.67□□□□□ -0.38
ApoeP08226 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
ApoeP08226 Gm29541-201ENSMUST00000191351 678 ntBASIC12.67□□□□□ -0.38
ApoeP08226 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.67□□□□□ -0.38
ApoeP08226 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.67□□□□□ -0.38
ApoeP08226 Gm45841-201ENSMUST00000207700 164 ntBASIC12.67□□□□□ -0.38
ApoeP08226 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.67□□□□□ -0.38
ApoeP08226 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.67□□□□□ -0.38
ApoeP08226 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ApoeP08226 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ApoeP08226 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ApoeP08226 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ApoeP08226 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ApoeP08226 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ApoeP08226 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ApoeP08226 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ApoeP08226 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ApoeP08226 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
ApoeP08226 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ApoeP08226 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ApoeP08226 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ApoeP08226 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms