Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.19□□□□□ -0.14
TnfP06804 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TnfP06804 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.19□□□□□ -0.14
TnfP06804 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.19□□□□□ -0.14
TnfP06804 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.19□□□□□ -0.14
TnfP06804 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.19□□□□□ -0.14
TnfP06804 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.18□□□□□ -0.14
TnfP06804 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Gm23931-201ENSMUST00000103842 109 ntBASIC14.18□□□□□ -0.14
TnfP06804 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.18□□□□□ -0.14
TnfP06804 Gm5370-201ENSMUST00000187187 574 ntBASIC14.18□□□□□ -0.14
TnfP06804 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TnfP06804 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.18□□□□□ -0.14
TnfP06804 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.18□□□□□ -0.14
TnfP06804 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.18□□□□□ -0.14
TnfP06804 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Gm10478-201ENSMUST00000084451 396 ntBASIC14.18□□□□□ -0.14
TnfP06804 Gm10268-201ENSMUST00000085340 555 ntBASIC14.18□□□□□ -0.14
TnfP06804 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.18□□□□□ -0.14
TnfP06804 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.18□□□□□ -0.14
TnfP06804 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
TnfP06804 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.18□□□□□ -0.14
TnfP06804 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.18□□□□□ -0.14
TnfP06804 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TnfP06804 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.17□□□□□ -0.14
TnfP06804 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TnfP06804 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TnfP06804 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.17□□□□□ -0.14
TnfP06804 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
TnfP06804 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TnfP06804 Gm27514-201ENSMUST00000183692 110 ntBASIC14.17□□□□□ -0.14
TnfP06804 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.17□□□□□ -0.14
TnfP06804 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TnfP06804 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TnfP06804 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TnfP06804 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.17□□□□□ -0.14
TnfP06804 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TnfP06804 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.17□□□□□ -0.14
TnfP06804 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TnfP06804 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TnfP06804 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms