Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Mzt1-203ENSMUST00000227948 952 ntBASIC11.76□□□□□ -0.53
P04224 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
P04224 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
P04224 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
P04224 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
P04224 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
P04224 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
P04224 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.76□□□□□ -0.53
P04224 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.75□□□□□ -0.53
P04224 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
P04224 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.75□□□□□ -0.53
P04224 Rpph1-201ENSMUST00000175096 319 ntBASIC11.75□□□□□ -0.53
P04224 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
P04224 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
P04224 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
P04224 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
P04224 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.75□□□□□ -0.53
P04224 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04224 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.75□□□□□ -0.53
P04224 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
P04224 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
P04224 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.74□□□□□ -0.53
P04224 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.74□□□□□ -0.53
P04224 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.74□□□□□ -0.53
P04224 Gm12882-201ENSMUST00000121696 517 ntBASIC11.74□□□□□ -0.53
P04224 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.74□□□□□ -0.53
P04224 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC11.74□□□□□ -0.53
P04224 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.74□□□□□ -0.53
P04224 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.74□□□□□ -0.53
P04224 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.74□□□□□ -0.53
P04224 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.74□□□□□ -0.53
P04224 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
P04224 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.74□□□□□ -0.53
P04224 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.74□□□□□ -0.53
P04224 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
P04224 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms