Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a1P02463 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a1P02463 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Col4a1P02463 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC16.14■□□□□ 0.18
Col4a1P02463 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Col4a1P02463 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC16.14■□□□□ 0.18
Col4a1P02463 Gm23363-201ENSMUST00000175024 79 ntBASIC16.14■□□□□ 0.18
Col4a1P02463 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Col4a1P02463 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Col4a1P02463 Gm8099-201ENSMUST00000200510 742 ntBASIC16.14■□□□□ 0.18
Col4a1P02463 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC16.14■□□□□ 0.18
Col4a1P02463 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Col4a1P02463 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC16.14■□□□□ 0.18
Col4a1P02463 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Col4a1P02463 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Col4a1P02463 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Col4a1P02463 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Col4a1P02463 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a1P02463 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a1P02463 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a1P02463 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a1P02463 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a1P02463 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a1P02463 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a1P02463 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a1P02463 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a1P02463 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a1P02463 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC16.14■□□□□ 0.17
Col4a1P02463 Mir6979-201ENSMUST00000183927 56 ntBASIC16.14■□□□□ 0.17
Col4a1P02463 Gm9678-201ENSMUST00000198979 1149 ntBASIC16.14■□□□□ 0.17
Col4a1P02463 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC16.14■□□□□ 0.17
Col4a1P02463 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a1P02463 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a1P02463 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a1P02463 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a1P02463 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.14■□□□□ 0.17
Col4a1P02463 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Col4a1P02463 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Col4a1P02463 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a1P02463 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.13■□□□□ 0.17
Col4a1P02463 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Col4a1P02463 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Gm14109-201ENSMUST00000118814 309 ntBASIC16.13■□□□□ 0.17
Col4a1P02463 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC16.13■□□□□ 0.17
Col4a1P02463 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Col4a1P02463 Mir5120-201ENSMUST00000175020 78 ntBASIC16.13■□□□□ 0.17
Col4a1P02463 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC16.13■□□□□ 0.17
Col4a1P02463 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.13■□□□□ 0.17
Col4a1P02463 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Gm4864-201ENSMUST00000219894 1461 ntBASIC16.13■□□□□ 0.17
Col4a1P02463 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Col4a1P02463 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a1P02463 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a1P02463 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a1P02463 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a1P02463 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a1P02463 Gm13665-201ENSMUST00000120830 528 ntBASIC16.12■□□□□ 0.17
Col4a1P02463 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC16.12■□□□□ 0.17
Col4a1P02463 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a1P02463 Gm43416-201ENSMUST00000201916 1015 ntBASIC16.12■□□□□ 0.17
Col4a1P02463 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a1P02463 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC16.12■□□□□ 0.17
Col4a1P02463 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a1P02463 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a1P02463 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a1P02463 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.12■□□□□ 0.17
Col4a1P02463 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a1P02463 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a1P02463 Gm44401-201ENSMUST00000204462 2375 ntBASIC16.12■□□□□ 0.17
Col4a1P02463 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a1P02463 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a1P02463 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a1P02463 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a1P02463 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Col4a1P02463 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a1P02463 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a1P02463 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a1P02463 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms