Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC9.79□□□□□ -0.84
TcraP01849 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Gm45011-201ENSMUST00000207620 2297 ntBASIC9.79□□□□□ -0.84
TcraP01849 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC9.78□□□□□ -0.84
TcraP01849 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC9.78□□□□□ -0.84
TcraP01849 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
TcraP01849 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
TcraP01849 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
TcraP01849 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
TcraP01849 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
TcraP01849 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC9.78□□□□□ -0.84
TcraP01849 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
TcraP01849 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC9.78□□□□□ -0.84
TcraP01849 AC154222.1-201ENSMUST00000223882 475 ntBASIC9.78□□□□□ -0.84
TcraP01849 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC9.78□□□□□ -0.84
TcraP01849 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC9.78□□□□□ -0.84
TcraP01849 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
TcraP01849 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
TcraP01849 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
TcraP01849 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC9.78□□□□□ -0.84
TcraP01849 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
TcraP01849 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC9.78□□□□□ -0.84
TcraP01849 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TcraP01849 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
TcraP01849 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
TcraP01849 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC9.77□□□□□ -0.84
TcraP01849 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
TcraP01849 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
TcraP01849 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
TcraP01849 Gm43463-201ENSMUST00000195967 1803 ntBASIC9.77□□□□□ -0.84
TcraP01849 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
TcraP01849 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
TcraP01849 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Matn2-203ENSMUST00000226766 3252 ntBASIC9.77□□□□□ -0.85
TcraP01849 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
TcraP01849 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
TcraP01849 AC164702.1-201ENSMUST00000220135 2212 ntBASIC9.77□□□□□ -0.85
TcraP01849 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC9.77□□□□□ -0.85
TcraP01849 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC9.77□□□□□ -0.85
TcraP01849 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Gm43332-201ENSMUST00000202511 1044 ntBASIC9.77□□□□□ -0.85
TcraP01849 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC9.77□□□□□ -0.85
TcraP01849 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC9.77□□□□□ -0.85
TcraP01849 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC9.77□□□□□ -0.85
TcraP01849 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC9.77□□□□□ -0.85
TcraP01849 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC9.77□□□□□ -0.85
TcraP01849 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.85
TcraP01849 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms