Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Gm13689-201ENSMUST00000119360 685 ntBASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Gm12341-201ENSMUST00000119724 503 ntBASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Auts2-212ENSMUST00000178555 309 ntBASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Gm38223-201ENSMUST00000194484 695 ntBASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.59□□□□□ -0.55
Igh-VJ558P01758 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Igh-VJ558P01758 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.55
Igh-VJ558P01758 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Igh-VJ558P01758 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.58□□□□□ -0.55
Igh-VJ558P01758 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Igh-VJ558P01758 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Gm26315-201ENSMUST00000083890 321 ntBASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igh-VJ558P01758 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igh-VJ558P01758 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Igh-VJ558P01758 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Igh-VJ558P01758 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igh-VJ558P01758 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igh-VJ558P01758 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igh-VJ558P01758 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igh-VJ558P01758 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igh-VJ558P01758 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igh-VJ558P01758 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Igh-VJ558P01758 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.57□□□□□ -0.56
Igh-VJ558P01758 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igh-VJ558P01758 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igh-VJ558P01758 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igh-VJ558P01758 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.57□□□□□ -0.56
Igh-VJ558P01758 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igh-VJ558P01758 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igh-VJ558P01758 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igh-VJ558P01758 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms