Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Ifna1P01572 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.3□□□□□ -0.6
Ifna1P01572 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Gm18889-201ENSMUST00000174284 929 ntBASIC11.3□□□□□ -0.6
Ifna1P01572 Gm8927-201ENSMUST00000181978 981 ntBASIC11.3□□□□□ -0.6
Ifna1P01572 Gm18766-201ENSMUST00000189811 808 ntBASIC11.3□□□□□ -0.6
Ifna1P01572 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Gm3222-201ENSMUST00000071282 990 ntBASIC11.3□□□□□ -0.6
Ifna1P01572 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Ifna1P01572 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.3□□□□□ -0.6
Ifna1P01572 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.3□□□□□ -0.6
Ifna1P01572 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ifna1P01572 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Ifna1P01572 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.3□□□□□ -0.6
Ifna1P01572 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ifna1P01572 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ifna1P01572 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ifna1P01572 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Ifna1P01572 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ifna1P01572 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.29□□□□□ -0.6
Ifna1P01572 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.29□□□□□ -0.6
Ifna1P01572 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ifna1P01572 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ifna1P01572 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.29□□□□□ -0.6
Ifna1P01572 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Ifna1P01572 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.29□□□□□ -0.6
Ifna1P01572 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.29□□□□□ -0.6
Ifna1P01572 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ifna1P01572 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ifna1P01572 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Ifna1P01572 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.29□□□□□ -0.6
Ifna1P01572 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Ifna1P01572 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ifna1P01572 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ifna1P01572 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ifna1P01572 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.29□□□□□ -0.6
Ifna1P01572 Gm16476-201ENSMUST00000221544 139 ntBASIC11.29□□□□□ -0.6
Ifna1P01572 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ifna1P01572 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ifna1P01572 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ifna1P01572 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ifna1P01572 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ifna1P01572 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ifna1P01572 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ifna1P01572 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ifna1P01572 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ifna1P01572 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.29□□□□□ -0.6
Ifna1P01572 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ifna1P01572 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ifna1P01572 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ifna1P01572 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ifna1P01572 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Ifna1P01572 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ifna1P01572 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ifna1P01572 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ifna1P01572 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Ifna1P01572 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ifna1P01572 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ifna1P01572 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ifna1P01572 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ifna1P01572 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ifna1P01572 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ifna1P01572 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ifna1P01572 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ifna1P01572 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ifna1P01572 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ifna1P01572 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ifna1P01572 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ifna1P01572 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Ifna1P01572 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ifna1P01572 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ifna1P01572 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Ifna1P01572 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ifna1P01572 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ifna1P01572 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ifna1P01572 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ifna1P01572 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ifna1P01572 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ifna1P01572 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ifna1P01572 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.28□□□□□ -0.6
Ifna1P01572 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.28□□□□□ -0.6
Ifna1P01572 Gm27494-201ENSMUST00000184735 189 ntBASIC11.28□□□□□ -0.6
Ifna1P01572 Gm21470-201ENSMUST00000187680 696 ntBASIC11.28□□□□□ -0.6
Ifna1P01572 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.28□□□□□ -0.6
Ifna1P01572 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms