Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.46□□□□□ -0.09
Vti1aO89116 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Vti1aO89116 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Vti1aO89116 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Vti1aO89116 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vti1aO89116 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vti1aO89116 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.45□□□□□ -0.1
Vti1aO89116 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1aO89116 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.45□□□□□ -0.1
Vti1aO89116 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Vti1aO89116 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1aO89116 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1aO89116 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1aO89116 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1aO89116 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1aO89116 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.45□□□□□ -0.1
Vti1aO89116 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Vti1aO89116 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1aO89116 Gm22331-201ENSMUST00000158066 136 ntBASIC14.45□□□□□ -0.1
Vti1aO89116 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.45□□□□□ -0.1
Vti1aO89116 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.45□□□□□ -0.1
Vti1aO89116 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.45□□□□□ -0.1
Vti1aO89116 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.45□□□□□ -0.1
Vti1aO89116 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1aO89116 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1aO89116 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Vti1aO89116 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.45□□□□□ -0.1
Vti1aO89116 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1aO89116 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1aO89116 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1aO89116 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1aO89116 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1aO89116 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1aO89116 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1aO89116 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Vti1aO89116 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1aO89116 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1aO89116 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1aO89116 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.45□□□□□ -0.1
Vti1aO89116 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.45□□□□□ -0.1
Vti1aO89116 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1aO89116 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1aO89116 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1aO89116 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1aO89116 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1aO89116 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vti1aO89116 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1aO89116 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.44□□□□□ -0.1
Vti1aO89116 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Vti1aO89116 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1aO89116 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.44□□□□□ -0.1
Vti1aO89116 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1aO89116 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1aO89116 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.44□□□□□ -0.1
Vti1aO89116 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1aO89116 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1aO89116 Gm12384-201ENSMUST00000119228 919 ntBASIC14.44□□□□□ -0.1
Vti1aO89116 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.44□□□□□ -0.1
Vti1aO89116 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.44□□□□□ -0.1
Vti1aO89116 Gm29127-201ENSMUST00000188304 517 ntBASIC14.44□□□□□ -0.1
Vti1aO89116 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.44□□□□□ -0.1
Vti1aO89116 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.44□□□□□ -0.1
Vti1aO89116 Gm10012-201ENSMUST00000078252 192 ntBASIC14.44□□□□□ -0.1
Vti1aO89116 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1aO89116 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1aO89116 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1aO89116 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1aO89116 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1aO89116 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1aO89116 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1aO89116 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.44□□□□□ -0.1
Vti1aO89116 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1aO89116 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1aO89116 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1aO89116 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vti1aO89116 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1aO89116 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1aO89116 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1aO89116 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1aO89116 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1aO89116 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1aO89116 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1aO89116 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Vti1aO89116 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1aO89116 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1aO89116 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1aO89116 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.43□□□□□ -0.1
Vti1aO89116 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1aO89116 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Vti1aO89116 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.43□□□□□ -0.1
Vti1aO89116 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1aO89116 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Vti1aO89116 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1aO89116 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.43□□□□□ -0.1
Vti1aO89116 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.43□□□□□ -0.1
Vti1aO89116 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Vti1aO89116 Gm5161-201ENSMUST00000075243 853 ntBASIC14.43□□□□□ -0.1
Vti1aO89116 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1aO89116 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1aO89116 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms