Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Apaf1O88879 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Apaf1O88879 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC17.41■□□□□ 0.38
Apaf1O88879 Gm29127-201ENSMUST00000188304 517 ntBASIC17.41■□□□□ 0.38
Apaf1O88879 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC17.41■□□□□ 0.38
Apaf1O88879 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.41■□□□□ 0.38
Apaf1O88879 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.41■□□□□ 0.38
Apaf1O88879 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC17.41■□□□□ 0.38
Apaf1O88879 CT573086.1-201ENSMUST00000227202 1074 ntBASIC17.41■□□□□ 0.38
Apaf1O88879 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Apaf1O88879 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Apaf1O88879 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Apaf1O88879 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Apaf1O88879 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Apaf1O88879 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Apaf1O88879 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Apaf1O88879 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Apaf1O88879 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Apaf1O88879 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Apaf1O88879 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Apaf1O88879 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Apaf1O88879 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC17.4■□□□□ 0.38
Apaf1O88879 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Apaf1O88879 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Apaf1O88879 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Apaf1O88879 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Apaf1O88879 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Apaf1O88879 Gm15824-201ENSMUST00000119516 955 ntBASIC17.4■□□□□ 0.38
Apaf1O88879 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.4■□□□□ 0.38
Apaf1O88879 Gm29649-201ENSMUST00000185649 419 ntBASIC17.4■□□□□ 0.38
Apaf1O88879 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC17.4■□□□□ 0.38
Apaf1O88879 AC134335.2-201ENSMUST00000227660 440 ntBASIC17.4■□□□□ 0.38
Apaf1O88879 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Apaf1O88879 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Apaf1O88879 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC17.4■□□□□ 0.38
Apaf1O88879 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Apaf1O88879 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Apaf1O88879 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Apaf1O88879 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Apaf1O88879 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC17.4■□□□□ 0.38
Apaf1O88879 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Apaf1O88879 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Apaf1O88879 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC17.4■□□□□ 0.38
Apaf1O88879 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Apaf1O88879 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Apaf1O88879 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Apaf1O88879 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Apaf1O88879 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Apaf1O88879 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Apaf1O88879 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Apaf1O88879 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Apaf1O88879 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Apaf1O88879 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Apaf1O88879 Gm10327-201ENSMUST00000105222 1002 ntBASIC17.39■□□□□ 0.37
Apaf1O88879 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Apaf1O88879 Gm8213-201ENSMUST00000118191 441 ntBASIC17.39■□□□□ 0.37
Apaf1O88879 Gm24644-201ENSMUST00000157114 139 ntBASIC17.39■□□□□ 0.37
Apaf1O88879 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Apaf1O88879 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Apaf1O88879 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC17.39■□□□□ 0.37
Apaf1O88879 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC17.39■□□□□ 0.37
Apaf1O88879 AC154595.3-201ENSMUST00000224579 384 ntBASIC17.39■□□□□ 0.37
Apaf1O88879 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.39■□□□□ 0.37
Apaf1O88879 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Apaf1O88879 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Apaf1O88879 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Apaf1O88879 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Apaf1O88879 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Apaf1O88879 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Apaf1O88879 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Apaf1O88879 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.38■□□□□ 0.37
Apaf1O88879 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Apaf1O88879 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Apaf1O88879 Gm15544-201ENSMUST00000118776 1531 ntBASIC17.38■□□□□ 0.37
Apaf1O88879 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Apaf1O88879 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Apaf1O88879 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Apaf1O88879 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Apaf1O88879 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC17.38■□□□□ 0.37
Apaf1O88879 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Apaf1O88879 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Apaf1O88879 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC17.38■□□□□ 0.37
Apaf1O88879 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Apaf1O88879 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Apaf1O88879 Gm12203-201ENSMUST00000118235 598 ntBASIC17.38■□□□□ 0.37
Apaf1O88879 Gm12209-201ENSMUST00000120089 596 ntBASIC17.38■□□□□ 0.37
Apaf1O88879 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Apaf1O88879 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC17.38■□□□□ 0.37
Apaf1O88879 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Apaf1O88879 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC17.38■□□□□ 0.37
Apaf1O88879 Gm27331-201ENSMUST00000183705 60 ntBASIC17.38■□□□□ 0.37
Apaf1O88879 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC17.38■□□□□ 0.37
Apaf1O88879 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Apaf1O88879 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Apaf1O88879 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Apaf1O88879 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Apaf1O88879 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Apaf1O88879 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Apaf1O88879 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC17.38■□□□□ 0.37
Apaf1O88879 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms