Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Gm4271-201ENSMUST00000174444 973 ntBASIC10.31□□□□□ -0.76
Gm10226O88253 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Gm10226O88253 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10226O88253 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10226O88253 Gm45784-201ENSMUST00000188360 142 ntBASIC10.31□□□□□ -0.76
Gm10226O88253 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Gm10226O88253 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.31□□□□□ -0.76
Gm10226O88253 Gm37497-201ENSMUST00000195830 798 ntBASIC10.31□□□□□ -0.76
Gm10226O88253 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.31□□□□□ -0.76
Gm10226O88253 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.31□□□□□ -0.76
Gm10226O88253 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.31□□□□□ -0.76
Gm10226O88253 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.31□□□□□ -0.76
Gm10226O88253 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.31□□□□□ -0.76
Gm10226O88253 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10226O88253 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10226O88253 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10226O88253 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10226O88253 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC10.31□□□□□ -0.76
Gm10226O88253 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10226O88253 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10226O88253 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10226O88253 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10226O88253 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.31□□□□□ -0.76
Gm10226O88253 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10226O88253 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Gm10226O88253 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Gm10226O88253 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10226O88253 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10226O88253 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10226O88253 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10226O88253 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10226O88253 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10226O88253 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.31□□□□□ -0.76
Gm10226O88253 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.31□□□□□ -0.76
Gm10226O88253 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10226O88253 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC10.3□□□□□ -0.76
Gm10226O88253 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Gm10226O88253 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
Gm10226O88253 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Mir874-201ENSMUST00000104769 76 ntBASIC10.3□□□□□ -0.76
Gm10226O88253 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.3□□□□□ -0.76
Gm10226O88253 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.3□□□□□ -0.76
Gm10226O88253 Mir1982-201ENSMUST00000157368 74 ntBASIC10.3□□□□□ -0.76
Gm10226O88253 Mir7221-201ENSMUST00000184009 72 ntBASIC10.3□□□□□ -0.76
Gm10226O88253 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.3□□□□□ -0.76
Gm10226O88253 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.3□□□□□ -0.76
Gm10226O88253 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.3□□□□□ -0.76
Gm10226O88253 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Gm10226O88253 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC10.3□□□□□ -0.76
Gm10226O88253 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
Gm10226O88253 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Gm10226O88253 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Gm10226O88253 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Gm10226O88253 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.3□□□□□ -0.76
Gm10226O88253 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10226O88253 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10226O88253 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10226O88253 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10226O88253 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10226O88253 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10226O88253 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Gm10226O88253 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.29□□□□□ -0.76
Gm10226O88253 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10226O88253 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10226O88253 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10226O88253 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10226O88253 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10226O88253 Gm2420-202ENSMUST00000202224 2249 ntBASIC10.29□□□□□ -0.76
Gm10226O88253 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10226O88253 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10226O88253 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10226O88253 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms