Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Sdc4O35988 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sdc4O35988 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.8□□□□□ -0.2
Sdc4O35988 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sdc4O35988 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
Sdc4O35988 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Gm29705-201ENSMUST00000212598 474 ntBASIC13.8□□□□□ -0.2
Sdc4O35988 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.8□□□□□ -0.2
Sdc4O35988 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.8□□□□□ -0.2
Sdc4O35988 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.8□□□□□ -0.2
Sdc4O35988 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sdc4O35988 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Sdc4O35988 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.8□□□□□ -0.2
Sdc4O35988 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
Sdc4O35988 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc4O35988 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc4O35988 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc4O35988 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sdc4O35988 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.79□□□□□ -0.2
Sdc4O35988 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc4O35988 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc4O35988 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sdc4O35988 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.79□□□□□ -0.2
Sdc4O35988 Gm12957-201ENSMUST00000117835 377 ntBASIC13.79□□□□□ -0.2
Sdc4O35988 Gm12384-201ENSMUST00000119228 919 ntBASIC13.79□□□□□ -0.2
Sdc4O35988 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc4O35988 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.79□□□□□ -0.2
Sdc4O35988 Gm27331-201ENSMUST00000183705 60 ntBASIC13.79□□□□□ -0.2
Sdc4O35988 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.79□□□□□ -0.2
Sdc4O35988 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.79□□□□□ -0.2
Sdc4O35988 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc4O35988 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc4O35988 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sdc4O35988 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.79□□□□□ -0.2
Sdc4O35988 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sdc4O35988 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc4O35988 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc4O35988 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.79□□□□□ -0.2
Sdc4O35988 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.79□□□□□ -0.2
Sdc4O35988 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc4O35988 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc4O35988 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc4O35988 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc4O35988 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sdc4O35988 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sdc4O35988 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sdc4O35988 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sdc4O35988 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sdc4O35988 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sdc4O35988 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.78□□□□□ -0.2
Sdc4O35988 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sdc4O35988 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sdc4O35988 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.78□□□□□ -0.2
Sdc4O35988 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.78□□□□□ -0.2
Sdc4O35988 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sdc4O35988 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Sdc4O35988 Gm12203-201ENSMUST00000118235 598 ntBASIC13.78□□□□□ -0.2
Sdc4O35988 Gm12209-201ENSMUST00000120089 596 ntBASIC13.78□□□□□ -0.2
Sdc4O35988 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sdc4O35988 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sdc4O35988 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.78□□□□□ -0.2
Sdc4O35988 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.78□□□□□ -0.2
Sdc4O35988 Mir1938-201ENSMUST00000158746 100 ntBASIC13.78□□□□□ -0.2
Sdc4O35988 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.78□□□□□ -0.2
Sdc4O35988 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.78□□□□□ -0.2
Sdc4O35988 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sdc4O35988 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sdc4O35988 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.78□□□□□ -0.2
Sdc4O35988 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sdc4O35988 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Sdc4O35988 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.78□□□□□ -0.2
Sdc4O35988 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sdc4O35988 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.78□□□□□ -0.2
Sdc4O35988 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.78□□□□□ -0.2
Sdc4O35988 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sdc4O35988 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.78□□□□□ -0.2
Sdc4O35988 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sdc4O35988 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms