Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.09□□□□□ -0.31
Npc1O35604 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Npc1O35604 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.09□□□□□ -0.31
Npc1O35604 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.09□□□□□ -0.31
Npc1O35604 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.09□□□□□ -0.31
Npc1O35604 Gm27892-201ENSMUST00000185017 106 ntBASIC13.09□□□□□ -0.31
Npc1O35604 Gm43433-201ENSMUST00000196573 481 ntBASIC13.09□□□□□ -0.31
Npc1O35604 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Npc1O35604 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Npc1O35604 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Npc1O35604 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Npc1O35604 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Npc1O35604 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.09□□□□□ -0.31
Npc1O35604 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Npc1O35604 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Npc1O35604 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Npc1O35604 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Npc1O35604 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Npc1O35604 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Npc1O35604 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.08□□□□□ -0.31
Npc1O35604 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Npc1O35604 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Npc1O35604 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.08□□□□□ -0.32
Npc1O35604 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Npc1O35604 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Npc1O35604 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Npc1O35604 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Npc1O35604 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.08□□□□□ -0.32
Npc1O35604 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Npc1O35604 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Npc1O35604 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.08□□□□□ -0.32
Npc1O35604 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Npc1O35604 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Gm2495-201ENSMUST00000191160 466 ntBASIC13.08□□□□□ -0.32
Npc1O35604 Gm42550-201ENSMUST00000201553 960 ntBASIC13.08□□□□□ -0.32
Npc1O35604 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Npc1O35604 Gm18041-201ENSMUST00000218210 618 ntBASIC13.08□□□□□ -0.32
Npc1O35604 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.08□□□□□ -0.32
Npc1O35604 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Npc1O35604 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.08□□□□□ -0.32
Npc1O35604 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Npc1O35604 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Npc1O35604 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Npc1O35604 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.08□□□□□ -0.32
Npc1O35604 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.08□□□□□ -0.32
Npc1O35604 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Npc1O35604 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Npc1O35604 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Npc1O35604 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Npc1O35604 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Npc1O35604 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
Npc1O35604 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Npc1O35604 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Npc1O35604 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms