Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1bO08603 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.9□□□□□ -0.5
Raet1bO08603 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.9□□□□□ -0.5
Raet1bO08603 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.9□□□□□ -0.5
Raet1bO08603 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1bO08603 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Raet1bO08603 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1bO08603 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1bO08603 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1bO08603 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1bO08603 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1bO08603 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.9□□□□□ -0.5
Raet1bO08603 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1bO08603 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1bO08603 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1bO08603 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.9□□□□□ -0.5
Raet1bO08603 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
Raet1bO08603 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Raet1bO08603 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Raet1bO08603 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Raet1bO08603 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.89□□□□□ -0.51
Raet1bO08603 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.89□□□□□ -0.51
Raet1bO08603 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Raet1bO08603 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.89□□□□□ -0.51
Raet1bO08603 Gm15678-201ENSMUST00000117573 960 ntBASIC11.89□□□□□ -0.51
Raet1bO08603 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Raet1bO08603 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Raet1bO08603 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.89□□□□□ -0.51
Raet1bO08603 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.89□□□□□ -0.51
Raet1bO08603 Gm10576-201ENSMUST00000191927 825 ntBASIC11.89□□□□□ -0.51
Raet1bO08603 Gm18041-201ENSMUST00000218210 618 ntBASIC11.89□□□□□ -0.51
Raet1bO08603 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Raet1bO08603 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.89□□□□□ -0.51
Raet1bO08603 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.89□□□□□ -0.51
Raet1bO08603 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.89□□□□□ -0.51
Raet1bO08603 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Raet1bO08603 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.89□□□□□ -0.51
Raet1bO08603 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Raet1bO08603 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1bO08603 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Raet1bO08603 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Syt7-205ENSMUST00000224135 1557 ntBASIC11.88□□□□□ -0.51
Raet1bO08603 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.88□□□□□ -0.51
Raet1bO08603 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.88□□□□□ -0.51
Raet1bO08603 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Raet1bO08603 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.88□□□□□ -0.51
Raet1bO08603 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Raet1bO08603 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.88□□□□□ -0.51
Raet1bO08603 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.88□□□□□ -0.51
Raet1bO08603 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.88□□□□□ -0.51
Raet1bO08603 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Raet1bO08603 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Raet1bO08603 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
Raet1bO08603 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1bO08603 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms