Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Gm27867-201ENSMUST00000184778 125 ntBASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Syt7-205ENSMUST00000224135 1557 ntBASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim55G3X8Y1 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.73□□□□□ -0.21
Trim55G3X8Y1 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.73□□□□□ -0.21
Trim55G3X8Y1 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Gm6296-201ENSMUST00000222599 943 ntBASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim55G3X8Y1 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms