Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm22065-201ENSMUST00000103753 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm22066-201ENSMUST00000103761 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm24932-201ENSMUST00000103763 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm24115-201ENSMUST00000103799 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm22190-201ENSMUST00000103827 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm22191-201ENSMUST00000103831 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm24721-201ENSMUST00000103849 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm28018-201ENSMUST00000103869 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm26399-201ENSMUST00000103937 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm25349-201ENSMUST00000177728 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm23616-201ENSMUST00000177797 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm25871-201ENSMUST00000177816 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm24752-201ENSMUST00000178240 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm24496-201ENSMUST00000178287 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm25649-201ENSMUST00000178476 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm25548-201ENSMUST00000178681 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm23147-201ENSMUST00000178841 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm26095-201ENSMUST00000179270 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm22171-201ENSMUST00000179283 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm23936-201ENSMUST00000179354 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm22619-201ENSMUST00000179516 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm25255-201ENSMUST00000179579 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm24755-201ENSMUST00000179691 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm26506-201ENSMUST00000179692 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm25086-201ENSMUST00000179931 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm23243-201ENSMUST00000180047 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm24659-201ENSMUST00000180212 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm24169-201ENSMUST00000180244 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm23689-201ENSMUST00000180354 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm27359-201ENSMUST00000184153 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm27785-201ENSMUST00000184268 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm27466-201ENSMUST00000184396 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm27703-201ENSMUST00000184836 110 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Chchd1-203ENSMUST00000224633 557 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Gm24420-201ENSMUST00000176676 59 ntBASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Gm28630-201ENSMUST00000187806 498 ntBASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Gm43474-201ENSMUST00000196415 774 ntBASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms