Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Gm3765-201ENSMUST00000130985 1447 ntBASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Gm14058-201ENSMUST00000116082 735 ntBASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Gm15711-201ENSMUST00000118889 535 ntBASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc188F6WEU2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Gm23251-201ENSMUST00000103773 110 ntBASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Gm43778-201ENSMUST00000199438 199 ntBASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Gm10312-201ENSMUST00000078515 489 ntBASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Daam2-202ENSMUST00000224595 1926 ntBASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc188F6WEU2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.4□□□□□ -0.27
Ccdc188F6WEU2 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Gm37246-201ENSMUST00000192665 835 ntBASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Mt1-202ENSMUST00000211807 1085 ntBASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms