Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.78□□□□□ -0.2
Atf6F6VAN0 Gm11524-201ENSMUST00000119349 807 ntBASIC13.78□□□□□ -0.2
Atf6F6VAN0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.78□□□□□ -0.2
Atf6F6VAN0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.78□□□□□ -0.2
Atf6F6VAN0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Gm26464-201ENSMUST00000157094 305 ntBASIC13.78□□□□□ -0.2
Atf6F6VAN0 Gm25925-201ENSMUST00000158314 306 ntBASIC13.78□□□□□ -0.2
Atf6F6VAN0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Auts2-212ENSMUST00000178555 309 ntBASIC13.78□□□□□ -0.2
Atf6F6VAN0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Gm19078-201ENSMUST00000206311 727 ntBASIC13.78□□□□□ -0.2
Atf6F6VAN0 Gm6218-201ENSMUST00000219812 628 ntBASIC13.78□□□□□ -0.2
Atf6F6VAN0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Atf6F6VAN0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.78□□□□□ -0.2
Atf6F6VAN0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf6F6VAN0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Atf6F6VAN0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Atf6F6VAN0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Atf6F6VAN0 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Atf6F6VAN0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atf6F6VAN0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atf6F6VAN0 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.77□□□□□ -0.21
Atf6F6VAN0 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.77□□□□□ -0.21
Atf6F6VAN0 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.77□□□□□ -0.21
Atf6F6VAN0 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.77□□□□□ -0.21
Atf6F6VAN0 Gm12403-201ENSMUST00000121384 959 ntBASIC13.77□□□□□ -0.21
Atf6F6VAN0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atf6F6VAN0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Atf6F6VAN0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atf6F6VAN0 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atf6F6VAN0 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.77□□□□□ -0.21
Atf6F6VAN0 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.77□□□□□ -0.21
Atf6F6VAN0 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.77□□□□□ -0.21
Atf6F6VAN0 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.77□□□□□ -0.21
Atf6F6VAN0 Gm10576-201ENSMUST00000191927 825 ntBASIC13.77□□□□□ -0.21
Atf6F6VAN0 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atf6F6VAN0 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.77□□□□□ -0.21
Atf6F6VAN0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.77□□□□□ -0.21
Atf6F6VAN0 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.77□□□□□ -0.21
Atf6F6VAN0 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.77□□□□□ -0.21
Atf6F6VAN0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atf6F6VAN0 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atf6F6VAN0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atf6F6VAN0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atf6F6VAN0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atf6F6VAN0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atf6F6VAN0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Atf6F6VAN0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Atf6F6VAN0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Atf6F6VAN0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atf6F6VAN0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Atf6F6VAN0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Atf6F6VAN0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.76□□□□□ -0.21
Atf6F6VAN0 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atf6F6VAN0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atf6F6VAN0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atf6F6VAN0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Atf6F6VAN0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atf6F6VAN0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atf6F6VAN0 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atf6F6VAN0 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Atf6F6VAN0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atf6F6VAN0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Atf6F6VAN0 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.76□□□□□ -0.21
Atf6F6VAN0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.76□□□□□ -0.21
Atf6F6VAN0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.76□□□□□ -0.21
Atf6F6VAN0 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.76□□□□□ -0.21
Atf6F6VAN0 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.76□□□□□ -0.21
Atf6F6VAN0 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.76□□□□□ -0.21
Atf6F6VAN0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atf6F6VAN0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Atf6F6VAN0 Gm5161-201ENSMUST00000075243 853 ntBASIC13.76□□□□□ -0.21
Atf6F6VAN0 Gm24447-201ENSMUST00000083977 338 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms