Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh17E9PXF0 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh17E9PXF0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdh17E9PXF0 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.5□□□□□ -0.41
Pcdh17E9PXF0 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh17E9PXF0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdh17E9PXF0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh17E9PXF0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh17E9PXF0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh17E9PXF0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh17E9PXF0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh17E9PXF0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh17E9PXF0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
Pcdh17E9PXF0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh17E9PXF0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdh17E9PXF0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh17E9PXF0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdh17E9PXF0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh17E9PXF0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Gm27731-201ENSMUST00000185192 107 ntBASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh17E9PXF0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Gm15770-201ENSMUST00000117498 584 ntBASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Gm11803-201ENSMUST00000119966 444 ntBASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Gm6152-201ENSMUST00000151704 340 ntBASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Gm24644-201ENSMUST00000157114 139 ntBASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Gm8598-201ENSMUST00000221184 836 ntBASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms