Protein–RNA interactions for Protein: E1U8D0

Soga1, Protein SOGA1, mousemouse

Predictions only

Length 1,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Soga1E1U8D0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Soga1E1U8D0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Soga1E1U8D0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Soga1E1U8D0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Soga1E1U8D0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Soga1E1U8D0 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC20.29■□□□□ 0.84
Soga1E1U8D0 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Soga1E1U8D0 Mmp14-206ENSMUST00000225641 3238 ntBASIC20.29■□□□□ 0.84
Soga1E1U8D0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Soga1E1U8D0 Gm7789-202ENSMUST00000211273 1400 ntBASIC20.29■□□□□ 0.84
Soga1E1U8D0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Soga1E1U8D0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC20.28■□□□□ 0.84
Soga1E1U8D0 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC20.28■□□□□ 0.84
Soga1E1U8D0 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC20.28■□□□□ 0.84
Soga1E1U8D0 AC154849.4-201ENSMUST00000224868 365 ntBASIC20.28■□□□□ 0.84
Soga1E1U8D0 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Gm43598-201ENSMUST00000202482 2479 ntBASIC20.28■□□□□ 0.84
Soga1E1U8D0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC20.28■□□□□ 0.84
Soga1E1U8D0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Soga1E1U8D0 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Soga1E1U8D0 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Soga1E1U8D0 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Soga1E1U8D0 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Soga1E1U8D0 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC20.27■□□□□ 0.84
Soga1E1U8D0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Soga1E1U8D0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Soga1E1U8D0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Soga1E1U8D0 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Soga1E1U8D0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Soga1E1U8D0 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Soga1E1U8D0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Soga1E1U8D0 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Soga1E1U8D0 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Soga1E1U8D0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
Soga1E1U8D0 Gm19353-201ENSMUST00000184561 445 ntBASIC20.27■□□□□ 0.83
Soga1E1U8D0 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Soga1E1U8D0 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC20.27■□□□□ 0.83
Soga1E1U8D0 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC20.27■□□□□ 0.83
Soga1E1U8D0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Soga1E1U8D0 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Soga1E1U8D0 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Soga1E1U8D0 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Soga1E1U8D0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Soga1E1U8D0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.83
Soga1E1U8D0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Soga1E1U8D0 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Soga1E1U8D0 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Gm17812-201ENSMUST00000204935 318 ntBASIC20.26■□□□□ 0.83
Soga1E1U8D0 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Soga1E1U8D0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Soga1E1U8D0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms