Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.01□□□□□ -0.49
Shank1D3YZU1 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Gm11439-201ENSMUST00000118598 409 ntBASIC12.01□□□□□ -0.49
Shank1D3YZU1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Gm11591-201ENSMUST00000120063 702 ntBASIC12.01□□□□□ -0.49
Shank1D3YZU1 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.01□□□□□ -0.49
Shank1D3YZU1 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Gm16372-201ENSMUST00000073088 450 ntBASIC12.01□□□□□ -0.49
Shank1D3YZU1 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.01□□□□□ -0.49
Shank1D3YZU1 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Shank1D3YZU1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12□□□□□ -0.49
Shank1D3YZU1 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12□□□□□ -0.49
Shank1D3YZU1 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12□□□□□ -0.49
Shank1D3YZU1 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Shank1D3YZU1 Gm25668-201ENSMUST00000157700 129 ntBASIC12□□□□□ -0.49
Shank1D3YZU1 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Shank1D3YZU1 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Gm43289-201ENSMUST00000200537 1475 ntBASIC12□□□□□ -0.49
Shank1D3YZU1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Gm9867-201ENSMUST00000192212 2647 ntBASIC12□□□□□ -0.49
Shank1D3YZU1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Shank1D3YZU1 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Shank1D3YZU1 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12□□□□□ -0.49
Shank1D3YZU1 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Shank1D3YZU1 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shank1D3YZU1 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Gm11222-201ENSMUST00000119005 738 ntBASIC11.99□□□□□ -0.49
Shank1D3YZU1 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Gm2445-201ENSMUST00000182798 989 ntBASIC11.99□□□□□ -0.49
Shank1D3YZU1 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shank1D3YZU1 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Gm29787-201ENSMUST00000222129 849 ntBASIC11.99□□□□□ -0.49
Shank1D3YZU1 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Gm22334-201ENSMUST00000158070 133 ntBASIC11.99□□□□□ -0.49
Shank1D3YZU1 Gm24548-201ENSMUST00000158650 108 ntBASIC11.99□□□□□ -0.49
Shank1D3YZU1 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Gm38144-201ENSMUST00000192790 465 ntBASIC11.99□□□□□ -0.49
Shank1D3YZU1 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.99□□□□□ -0.49
Shank1D3YZU1 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.99□□□□□ -0.49
Shank1D3YZU1 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shank1D3YZU1 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.98□□□□□ -0.49
Shank1D3YZU1 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms