Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Tmf1B9EKI3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Tmf1B9EKI3 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC18.11■□□□□ 0.49
Tmf1B9EKI3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmf1B9EKI3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmf1B9EKI3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Tmf1B9EKI3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC18.11■□□□□ 0.49
Tmf1B9EKI3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC18.11■□□□□ 0.49
Tmf1B9EKI3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmf1B9EKI3 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC18.11■□□□□ 0.49
Tmf1B9EKI3 Gm28386-201ENSMUST00000189147 1849 ntBASIC18.11■□□□□ 0.49
Tmf1B9EKI3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC18.11■□□□□ 0.49
Tmf1B9EKI3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmf1B9EKI3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Tmf1B9EKI3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmf1B9EKI3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmf1B9EKI3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Gm16202-201ENSMUST00000117532 544 ntBASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Gm12203-201ENSMUST00000118235 598 ntBASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Gm12209-201ENSMUST00000120089 596 ntBASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Gm6161-201ENSMUST00000121942 1102 ntBASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Gm6254-201ENSMUST00000168178 1072 ntBASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Gm6153-201ENSMUST00000172004 1058 ntBASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Gm38230-201ENSMUST00000193572 1159 ntBASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Gm5641-202ENSMUST00000198699 1080 ntBASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Tmf1B9EKI3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Gm11618-201ENSMUST00000117946 267 ntBASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Gm27331-201ENSMUST00000183705 60 ntBASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Gm44985-201ENSMUST00000206202 1016 ntBASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tmf1B9EKI3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tmf1B9EKI3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tmf1B9EKI3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Tmf1B9EKI3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tmf1B9EKI3 Gm43134-201ENSMUST00000199434 1886 ntBASIC18.08■□□□□ 0.49
Tmf1B9EKI3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tmf1B9EKI3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Tmf1B9EKI3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmf1B9EKI3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmf1B9EKI3 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Tmf1B9EKI3 Gm37922-201ENSMUST00000195596 455 ntBASIC18.08■□□□□ 0.48
Tmf1B9EKI3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Tmf1B9EKI3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC18.08■□□□□ 0.48
Tmf1B9EKI3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC18.08■□□□□ 0.48
Tmf1B9EKI3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC18.08■□□□□ 0.48
Tmf1B9EKI3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms