Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Gm12314-201ENSMUST00000118104 538 ntBASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn7aB1AYL1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC16.89■□□□□ 0.3
Scn7aB1AYL1 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Scn7aB1AYL1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Scn7aB1AYL1 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn7aB1AYL1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16.89■□□□□ 0.29
Scn7aB1AYL1 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn7aB1AYL1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn7aB1AYL1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn7aB1AYL1 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn7aB1AYL1 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn7aB1AYL1 Rprl1-202ENSMUST00000198476 238 ntBASIC16.89■□□□□ 0.29
Scn7aB1AYL1 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Scn7aB1AYL1 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Scn7aB1AYL1 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Scn7aB1AYL1 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn7aB1AYL1 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn7aB1AYL1 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn7aB1AYL1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn7aB1AYL1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn7aB1AYL1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn7aB1AYL1 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Gm12058-201ENSMUST00000118614 437 ntBASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Gm43908-201ENSMUST00000205074 1472 ntBASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Gm5846-201ENSMUST00000193146 1414 ntBASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Mir874-201ENSMUST00000104769 76 ntBASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Gm11597-201ENSMUST00000121423 964 ntBASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Gm18753-201ENSMUST00000201000 566 ntBASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Gm19187-201ENSMUST00000206781 892 ntBASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Nsd1-205ENSMUST00000224693 852 ntBASIC16.88■□□□□ 0.29
Scn7aB1AYL1 AC154222.2-201ENSMUST00000225848 607 ntBASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Scn7aB1AYL1 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn7aB1AYL1 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms