Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.11□□□□□ -0.31
Chd3B1AR17 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.11□□□□□ -0.31
Chd3B1AR17 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.11□□□□□ -0.31
Chd3B1AR17 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.11□□□□□ -0.31
Chd3B1AR17 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chd3B1AR17 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chd3B1AR17 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd3B1AR17 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd3B1AR17 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.11□□□□□ -0.31
Chd3B1AR17 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd3B1AR17 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.11□□□□□ -0.31
Chd3B1AR17 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd3B1AR17 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd3B1AR17 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd3B1AR17 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Chd3B1AR17 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd3B1AR17 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.11□□□□□ -0.31
Chd3B1AR17 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd3B1AR17 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd3B1AR17 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd3B1AR17 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd3B1AR17 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd3B1AR17 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chd3B1AR17 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Chd3B1AR17 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chd3B1AR17 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.11□□□□□ -0.31
Chd3B1AR17 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Chd3B1AR17 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Chd3B1AR17 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.11□□□□□ -0.31
Chd3B1AR17 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd3B1AR17 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd3B1AR17 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.1□□□□□ -0.31
Chd3B1AR17 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
Chd3B1AR17 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Chd3B1AR17 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Chd3B1AR17 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.1□□□□□ -0.31
Chd3B1AR17 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Chd3B1AR17 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Gm16479-201ENSMUST00000121706 932 ntBASIC13.1□□□□□ -0.31
Chd3B1AR17 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.1□□□□□ -0.31
Chd3B1AR17 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Gm42693-201ENSMUST00000196779 631 ntBASIC13.1□□□□□ -0.31
Chd3B1AR17 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Chd3B1AR17 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Chd3B1AR17 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.1□□□□□ -0.31
Chd3B1AR17 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.1□□□□□ -0.31
Chd3B1AR17 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Chd3B1AR17 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chd3B1AR17 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd3B1AR17 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chd3B1AR17 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.09□□□□□ -0.31
Chd3B1AR17 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.09□□□□□ -0.31
Chd3B1AR17 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chd3B1AR17 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.09□□□□□ -0.31
Chd3B1AR17 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.09□□□□□ -0.31
Chd3B1AR17 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd3B1AR17 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Chd3B1AR17 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd3B1AR17 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd3B1AR17 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd3B1AR17 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd3B1AR17 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd3B1AR17 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd3B1AR17 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd3B1AR17 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd3B1AR17 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Chd3B1AR17 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd3B1AR17 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd3B1AR17 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd3B1AR17 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.09□□□□□ -0.31
Chd3B1AR17 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd3B1AR17 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd3B1AR17 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd3B1AR17 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd3B1AR17 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd3B1AR17 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms