Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC16.28■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC16.28■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Abhd6-203ENSMUST00000225234 1958 ntBASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Gm18041-201ENSMUST00000218210 618 ntBASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atg4a-psA0A0G2JFS9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC16.27■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.27■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Gm18630-201ENSMUST00000222109 1397 ntBASIC16.26■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.26■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.26■□□□□ 0.19
Atg4a-psA0A0G2JFS9 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atg4a-psA0A0G2JFS9 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Gm14350-201ENSMUST00000116642 640 ntBASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Itm2b-204ENSMUST00000228637 783 ntBASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms