Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm24245-201ENSMUST00000157318 57 ntBASIC11.01□□□□□ -0.65
Trav18A0A075B656 Gm5425-201ENSMUST00000214125 459 ntBASIC11.01□□□□□ -0.65
Trav18A0A075B656 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav18A0A075B656 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.01□□□□□ -0.65
Trav18A0A075B656 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.01□□□□□ -0.65
Trav18A0A075B656 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav18A0A075B656 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Ankra2-208ENSMUST00000226100 1476 ntBASIC11□□□□□ -0.65
Trav18A0A075B656 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11□□□□□ -0.65
Trav18A0A075B656 Gm7002-201ENSMUST00000221386 2165 ntBASIC11□□□□□ -0.65
Trav18A0A075B656 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11□□□□□ -0.65
Trav18A0A075B656 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Trav18A0A075B656 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Gm14767-201ENSMUST00000121559 586 ntBASIC11□□□□□ -0.65
Trav18A0A075B656 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Trav18A0A075B656 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11□□□□□ -0.65
Trav18A0A075B656 Gm27680-201ENSMUST00000184192 160 ntBASIC11□□□□□ -0.65
Trav18A0A075B656 Gm43575-201ENSMUST00000196420 516 ntBASIC11□□□□□ -0.65
Trav18A0A075B656 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11□□□□□ -0.65
Trav18A0A075B656 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11□□□□□ -0.65
Trav18A0A075B656 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Trav18A0A075B656 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav18A0A075B656 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11□□□□□ -0.65
Trav18A0A075B656 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav18A0A075B656 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav18A0A075B656 Gm43273-201ENSMUST00000199649 2594 ntBASIC11□□□□□ -0.65
Trav18A0A075B656 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11□□□□□ -0.65
Trav18A0A075B656 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav18A0A075B656 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav18A0A075B656 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Gm17837-201ENSMUST00000186435 985 ntBASIC10.99□□□□□ -0.65
Trav18A0A075B656 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav18A0A075B656 AC154846.1-201ENSMUST00000226278 862 ntBASIC10.99□□□□□ -0.65
Trav18A0A075B656 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms