Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Gm7730-201ENSMUST00000212486 454 ntBASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Gm6218-201ENSMUST00000219812 628 ntBASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Gm38144-201ENSMUST00000192790 465 ntBASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb2S4R1M3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 Gm44855-201ENSMUST00000205725 362 ntBASIC13.42□□□□□ -0.26
H2afb2S4R1M3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.42□□□□□ -0.26
H2afb2S4R1M3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb2S4R1M3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Mir874-201ENSMUST00000104769 76 ntBASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms