Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn9Q9Z0S7 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Gm11524-201ENSMUST00000119349 807 ntBASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Gm12403-201ENSMUST00000121384 959 ntBASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Gm19078-201ENSMUST00000206311 727 ntBASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn9Q9Z0S7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Gm14057-201ENSMUST00000120631 482 ntBASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cldn9Q9Z0S7 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cldn9Q9Z0S7 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn9Q9Z0S7 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn9Q9Z0S7 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn9Q9Z0S7 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms