Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubd1Q9R1K7 Proscos-202ENSMUST00000178990 666 ntBASIC13.6□□□□□ -0.23
Tubd1Q9R1K7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tubd1Q9R1K7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.6□□□□□ -0.23
Tubd1Q9R1K7 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tubd1Q9R1K7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Tubd1Q9R1K7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.6□□□□□ -0.23
Tubd1Q9R1K7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubd1Q9R1K7 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubd1Q9R1K7 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tubd1Q9R1K7 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Tubd1Q9R1K7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubd1Q9R1K7 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubd1Q9R1K7 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubd1Q9R1K7 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.6□□□□□ -0.23
Tubd1Q9R1K7 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tubd1Q9R1K7 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubd1Q9R1K7 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubd1Q9R1K7 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubd1Q9R1K7 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Mir1894-201ENSMUST00000122802 81 ntBASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Gm9002-201ENSMUST00000178437 499 ntBASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Gm6244-201ENSMUST00000178732 841 ntBASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubd1Q9R1K7 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tubd1Q9R1K7 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tubd1Q9R1K7 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Tubd1Q9R1K7 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.58□□□□□ -0.23
Tubd1Q9R1K7 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tubd1Q9R1K7 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tubd1Q9R1K7 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Tubd1Q9R1K7 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.58□□□□□ -0.23
Tubd1Q9R1K7 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Gm8213-201ENSMUST00000118191 441 ntBASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Gm15806-201ENSMUST00000120696 955 ntBASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.58□□□□□ -0.24
Tubd1Q9R1K7 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms