Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Gm25990-201ENSMUST00000102440 86 ntBASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Gm2451-201ENSMUST00000199447 999 ntBASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Gm10290-201ENSMUST00000200451 999 ntBASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trem1Q9JKE2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.01□□□□□ -0.49
Trem1Q9JKE2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trem1Q9JKE2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12□□□□□ -0.49
Trem1Q9JKE2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12□□□□□ -0.49
Trem1Q9JKE2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12□□□□□ -0.49
Trem1Q9JKE2 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12□□□□□ -0.49
Trem1Q9JKE2 Gm14859-201ENSMUST00000117752 357 ntBASIC12□□□□□ -0.49
Trem1Q9JKE2 Gm13836-201ENSMUST00000121159 501 ntBASIC12□□□□□ -0.49
Trem1Q9JKE2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trem1Q9JKE2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Gm4899-201ENSMUST00000178708 719 ntBASIC12□□□□□ -0.49
Trem1Q9JKE2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12□□□□□ -0.49
Trem1Q9JKE2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Olfr286-202ENSMUST00000205305 969 ntBASIC12□□□□□ -0.49
Trem1Q9JKE2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trem1Q9JKE2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12□□□□□ -0.49
Trem1Q9JKE2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12□□□□□ -0.49
Trem1Q9JKE2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12□□□□□ -0.49
Trem1Q9JKE2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trem1Q9JKE2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms