Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Gm12428-201ENSMUST00000119844 727 ntBASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Gm27618-201ENSMUST00000183671 60 ntBASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Gm46209-201ENSMUST00000217912 553 ntBASIC12.6□□□□□ -0.39
Trim39Q9ESN2 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim39Q9ESN2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Gm15653-201ENSMUST00000119247 907 ntBASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Gm17837-201ENSMUST00000186435 985 ntBASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Gm19324-201ENSMUST00000213229 1169 ntBASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Gm6888-201ENSMUST00000221983 706 ntBASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim39Q9ESN2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim39Q9ESN2 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim39Q9ESN2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim39Q9ESN2 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.58□□□□□ -0.39
Trim39Q9ESN2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trim39Q9ESN2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim39Q9ESN2 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
Trim39Q9ESN2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim39Q9ESN2 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Gm18027-201ENSMUST00000218947 619 ntBASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms