Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgn3Q9DCB1 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Mir7221-201ENSMUST00000184009 72 ntBASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Gm27301-201ENSMUST00000184012 127 ntBASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 AA619741-201ENSMUST00000195095 646 ntBASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.59□□□□□ -0.39
Hmgn3Q9DCB1 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hmgn3Q9DCB1 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hmgn3Q9DCB1 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Gm27741-201ENSMUST00000185060 237 ntBASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Gm7461-201ENSMUST00000058918 827 ntBASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgn3Q9DCB1 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms