Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Gm15236-201ENSMUST00000117309 379 ntBASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Gm13123-201ENSMUST00000122173 492 ntBASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Gm26083-201ENSMUST00000157904 193 ntBASIC13.13□□□□□ -0.31
Rrp8Q9DB85 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.13□□□□□ -0.31
Rrp8Q9DB85 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Mir877-201ENSMUST00000104738 85 ntBASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Gm6023-201ENSMUST00000118217 606 ntBASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Gm45865-201ENSMUST00000211815 945 ntBASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rrp8Q9DB85 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Gm8805-201ENSMUST00000117848 313 ntBASIC13.11□□□□□ -0.31
Rrp8Q9DB85 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Gm27320-201ENSMUST00000184892 109 ntBASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Gm37489-201ENSMUST00000191883 159 ntBASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Gm44069-201ENSMUST00000204898 506 ntBASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms