Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Gm13689-201ENSMUST00000119360 685 ntBASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Gm44719-201ENSMUST00000206404 149 ntBASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.01□□□□□ -0.17
Chmp2aQ9DB34 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14□□□□□ -0.17
Chmp2aQ9DB34 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Gm15678-201ENSMUST00000117573 960 ntBASIC14□□□□□ -0.17
Chmp2aQ9DB34 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Gm29608-201ENSMUST00000190444 463 ntBASIC14□□□□□ -0.17
Chmp2aQ9DB34 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14□□□□□ -0.17
Chmp2aQ9DB34 AC154239.3-201ENSMUST00000226933 674 ntBASIC14□□□□□ -0.17
Chmp2aQ9DB34 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Gm3695-201ENSMUST00000087222 1009 ntBASIC14□□□□□ -0.17
Chmp2aQ9DB34 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2aQ9DB34 Gm43399-201ENSMUST00000202546 2374 ntBASIC14□□□□□ -0.17
Chmp2aQ9DB34 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Chmp2aQ9DB34 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2aQ9DB34 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2aQ9DB34 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2aQ9DB34 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2aQ9DB34 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2aQ9DB34 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2aQ9DB34 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms