Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Snora78-201ENSMUST00000158630 128 ntBASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Proscos-202ENSMUST00000178990 666 ntBASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rsph3bQ9DA80 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Gm5687-201ENSMUST00000118252 640 ntBASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Gm43818-201ENSMUST00000200605 466 ntBASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rsph3bQ9DA80 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Gm8062-201ENSMUST00000139696 444 ntBASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rsph3bQ9DA80 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Rsph3bQ9DA80 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rsph3bQ9DA80 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms