Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bl1Q9D701 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Gm9385-201ENSMUST00000117563 472 ntBASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Gm6376-201ENSMUST00000209407 580 ntBASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 AV026068-213ENSMUST00000223675 1171 ntBASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Gm7461-201ENSMUST00000058918 827 ntBASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Upk3bl1Q9D701 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Gm28975-201ENSMUST00000186412 686 ntBASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Gm43347-201ENSMUST00000200226 580 ntBASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Gm43084-201ENSMUST00000200696 947 ntBASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Upk3bl1Q9D701 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms