Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3a3Q9D554 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Syt7-205ENSMUST00000224135 1557 ntBASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3a3Q9D554 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Rps4l-201ENSMUST00000071745 943 ntBASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Sf3a3Q9D554 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Birc2-201ENSMUST00000054878 378 ntBASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sf3a3Q9D554 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Gm15957-201ENSMUST00000118893 974 ntBASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Ank2-226ENSMUST00000189368 339 ntBASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Gm10060-201ENSMUST00000212002 111 ntBASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms