Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssu72Q9CY97 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.32□□□□□ -0.28
Ssu72Q9CY97 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.32□□□□□ -0.28
Ssu72Q9CY97 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Gm14494-201ENSMUST00000118786 435 ntBASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Gm19931-201ENSMUST00000198920 368 ntBASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Gm43125-201ENSMUST00000201724 730 ntBASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Gm17330-201ENSMUST00000221047 165 ntBASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Ssu72Q9CY97 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms