Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Gm16215-201ENSMUST00000161990 637 ntBASIC14.06□□□□□ -0.16
RpainQ9CWY9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Gm27838-201ENSMUST00000184829 128 ntBASIC14.06□□□□□ -0.16
RpainQ9CWY9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Gm45453-201ENSMUST00000211758 853 ntBASIC14.06□□□□□ -0.16
RpainQ9CWY9 Gm7730-201ENSMUST00000212486 454 ntBASIC14.06□□□□□ -0.16
RpainQ9CWY9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Syt7-204ENSMUST00000223586 1344 ntBASIC14.06□□□□□ -0.16
RpainQ9CWY9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RpainQ9CWY9 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RpainQ9CWY9 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.05□□□□□ -0.16
RpainQ9CWY9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RpainQ9CWY9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RpainQ9CWY9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.05□□□□□ -0.16
RpainQ9CWY9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Gm43703-201ENSMUST00000200523 763 ntBASIC14.05□□□□□ -0.16
RpainQ9CWY9 Gm44855-201ENSMUST00000205725 362 ntBASIC14.05□□□□□ -0.16
RpainQ9CWY9 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.05□□□□□ -0.16
RpainQ9CWY9 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Syt7-205ENSMUST00000224135 1557 ntBASIC14.05□□□□□ -0.16
RpainQ9CWY9 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RpainQ9CWY9 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RpainQ9CWY9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RpainQ9CWY9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
RpainQ9CWY9 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.04□□□□□ -0.16
RpainQ9CWY9 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.04□□□□□ -0.16
RpainQ9CWY9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.04□□□□□ -0.16
RpainQ9CWY9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms