Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.21□□□□□ -0.45
Smurf1Q9CUN6 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smurf1Q9CUN6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smurf1Q9CUN6 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Smurf1Q9CUN6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.21□□□□□ -0.45
Smurf1Q9CUN6 Rpph1-201ENSMUST00000175096 319 ntBASIC12.21□□□□□ -0.45
Smurf1Q9CUN6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.21□□□□□ -0.45
Smurf1Q9CUN6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smurf1Q9CUN6 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.21□□□□□ -0.45
Smurf1Q9CUN6 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.21□□□□□ -0.45
Smurf1Q9CUN6 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smurf1Q9CUN6 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smurf1Q9CUN6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smurf1Q9CUN6 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smurf1Q9CUN6 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smurf1Q9CUN6 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smurf1Q9CUN6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smurf1Q9CUN6 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.21□□□□□ -0.46
Smurf1Q9CUN6 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smurf1Q9CUN6 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.21□□□□□ -0.46
Smurf1Q9CUN6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smurf1Q9CUN6 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smurf1Q9CUN6 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Gm11543-201ENSMUST00000120758 370 ntBASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Gm27494-201ENSMUST00000184735 189 ntBASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Gm43575-201ENSMUST00000196420 516 ntBASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Smurf1Q9CUN6 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.19□□□□□ -0.46
Smurf1Q9CUN6 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms