Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Gm17208-201ENSMUST00000168388 535 ntBASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Gm38317-201ENSMUST00000195564 343 ntBASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Gm29787-201ENSMUST00000222129 849 ntBASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Gm13570-201ENSMUST00000140763 309 ntBASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cldnd1Q9CQX5 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Gm7857-201ENSMUST00000117957 358 ntBASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldnd1Q9CQX5 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cldnd1Q9CQX5 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldnd1Q9CQX5 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 268.7 ms