Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Gm10156-201ENSMUST00000122364 462 ntBASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Lsm7Q9CQQ8 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Gm12742-201ENSMUST00000117326 410 ntBASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Gm27731-201ENSMUST00000185192 107 ntBASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Gm29127-201ENSMUST00000188304 517 ntBASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Gm43818-201ENSMUST00000200605 466 ntBASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm7Q9CQQ8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm7Q9CQQ8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm7Q9CQQ8 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm7Q9CQQ8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm7Q9CQQ8 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm7Q9CQQ8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm7Q9CQQ8 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm7Q9CQQ8 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm7Q9CQQ8 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm7Q9CQQ8 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm7Q9CQQ8 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm7Q9CQQ8 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm7Q9CQQ8 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm7Q9CQQ8 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm7Q9CQQ8 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Lsm7Q9CQQ8 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms